[BioC] heatmap

A.J. Rossini rossini@u.washington.edu
Fri, 21 Feb 2003 14:03:12 -0800


"Liaw, Andy" <andy_liaw@merck.com> writes:


> The wisdom of looking at such a thing aside, has anyone implemented
> `heatmap' in R?  (That's the one where the data matrix is shown in a color
> image, with dendrograms on the top and left sides of it indicating the
> clustering of rows and columns.)  
>
> I tried looking for it on the BioConductor website but didn't see any, so I
> went ahead and whipped up a heatmap function to do it.  If anyone is
> interested, let me know.

I'm interested...  ideally, you'd have the 2-way heat map (i.e. gene
and experiment clusters) but that is another story... (gosh, and I'd
be asking for alot, eh?)

best,
-tony

-- 
A.J. Rossini				Rsrch. Asst. Prof. of Biostatistics
U. of Washington Biostatistics		rossini@u.washington.edu	
FHCRC/SCHARP/HIV Vaccine Trials Net	rossini@scharp.org
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