[BioC] if / when the bug was fixed in RMA function eset <- rma()?

[Anna Gustafsson]

Dear all,

I have a question considering the bug in the RMA function eset <- rma() that was highlighted (by Hu Wei) in the end of January this year. He found that the results from this rma streamline version differed from the results obtained using the individual commands: eset<. expresso(), normalize.method=quantiles, bg.method="rma", pmcorrect.method= "rma" etc. etc.

I need to know if / when was this bug fixed? (Have used eset <- rma() for analysis just recently....)
Or do I have to use the eset <- justRMA (Data) command instead?

Best regards
Anna

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Anna Gustafsson

Royal Institute of Technology
AlbaNova University Center
Stockholm Center for Physics, Astronomy and Biotechnology
Department of Molecular Biotechnology
106 91 Stockholm, Sweden

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