[BioC] Re: writing exprSet to a flat file
Rafael A. Irizarry
rafa@jhu.edu
Wed, 03 Apr 2002 08:36:35 -0500 (EST)
i think we need a basic write function for people who dont want to learn
to much R. especially if they want to import into things like genespring
etc...ill just write a simple one and put it in Biobase.
On Wed, 3 Apr 2002, Laurent Gautier wrote:
> On Tue, Apr 02, 2002 at 01:50:05PM -0500, Rafael A. Irizarry wrote:
> > is there (or are there plans of writing) a method for the exprSet
> > class that writes out expression values to a flat file? if not ill put one
> > in affy.
> >
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> I think I saw a related post not too long ago in the bioconductor list.
>
> I am not familiar enough with the exprSet to know if everything they include could be dumped in a flat file (sometimes objects can be put in files through serialization).
>
> I would be in favor of incitating users to learn a bit of R too... having to solve, or ask how to do, things like 'how do I write expression values from an instance of exprSet in a file ?' appears to me like a good way to do it....
>
> comments ?
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> --------------------------------------------------------------
> Laurent Gautier CBS, Building 208, DTU
> PhD. Student D-2800 Lyngby,Denmark
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